PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_02064.1_g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 409aa    MW: 45675.8 Da    PI: 9.5537
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_02064.1_g00010.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.63.6e-15331386559
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevakl 59 
                              +r++r++kNRe+A rsR+RK+a++ eLee+v++L++ N++L +k++e ++k+ ++l
  Rsa1.0_02064.1_g00010.1 331 RRQKRMIKNRESAARSRARKQAYTLELEEEVAQLKQLNEELhRKQVEIIEKQKQQL 386
                              69***************************************557777788877777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-14327392IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.438329374IPR004827Basic-leucine zipper domain
PfamPF001702.8E-13331388IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.9E-14331386No hitNo description
CDDcd147073.83E-24331385No hitNo description
SuperFamilySSF579593.69E-10331382No hitNo description
PROSITE patternPS000360334349IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MGSRMNFVDV VRNEVFNAKQ PTLGTGLPLT RQNSVFSLTF DEFQNSWGGS GTGTGKDFGS  60
MNMDELLKNI WTAEECHSMM NSGDNNGGLS VGVGGETGGL QRQGSITLPR TISQKRVDDV  120
WKELMREEDE TGASGVPQRQ QTLGEMTLEE FLLKAGVVRE EPQQQVERLD NFDGGFYGFG  180
SNAGLDSARI GFGPNQPYGA TVRPNLLTTQ TQPLQMLQPQ KVHQPQPLIP KQDGTYPKQT  240
TISLDNRSQP PTQCQEVKPS ILGVRDRPMN SNLLQAVDFK RGLTVAAVSP GSQMSPDMTP  300
KSNKDASLLP VPYMFGRARK TGAVLEKVIE RRQKRMIKNR ESAARSRARK QAYTLELEEE  360
VAQLKQLNEE LHRKQVEIIE KQKQQLLEPM RQPWGCKKQC LRRTSTGPW
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00038PBMTransfer from AT4G34000Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX1228930.0JX122893.1 Brassica napus ABA-responsive element binding factor 3 (ABF3.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001302856.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 6
RefseqXP_013733123.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6
RefseqXP_013733124.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6
SwissprotQ9M7Q30.0AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6
TrEMBLX2C4890.0X2C489_BRANA; ABA-responsive element binding factor 3
STRINGfgenesh2_kg.7__705__AT4G34000.10.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM73427129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.21e-167abscisic acid responsive elements-binding factor 3